Release notes#
0.2.16#
Release date: Oct. 20th, 2023
Bug fix.
0.2.14#
Release date:
Add plot functions.
0.2.13#
Release date: Aug. 16, 2023
Use MANIFEST.in
0.2.13#
Release date: Aug. 16, 2023
Migrate setup.py to pyproject.toml
0.2.12#
Release date: Aug. 16, 2023
Add plot functions.
Bug fix.
0.2.11#
Release date: Jun. 19, 2023
getitem method for STDataset.
Deduplicate gene names process now follows behavior of make.unique()
function in R.
0.2.10#
Release date: Dec. 6, 2022
Rank cluster for gene pairs detection.
0.2.9#
Release date: Nov. 24, 2022
Bug fix.
0.2.8#
Release date: Nov. 24, 2022
Bug fix.
0.2.7#
Release date: Nov. 24, 2022
Find gene combinations with svgbit.
Use sparse DataFrame.
Minor fix.
0.2.6#
Release date: Sept. 29, 2022
Add txt table support.
Use sparse data structures.
Now normalizers may specify with parameter normalization when using
command-line interface.
Minor fix.
0.2.5#
Release date: Sept. 16, 2022
Add anndata hdf5 file support.
Minor fix.
0.2.0#
Release date: Sept. 13, 2022
Command-line interface change: only support load_10X.
New function add: identify SVG clusters to each spot, i.e, spot type recognization.
New visualization add: spot type map
New visualization add: SVG cluster distribution map for single cluster.
0.1.2#
Release date: Aug. 12, 2022
Bug fix: Use -logP as AI weight matrix.
0.1.0#
Deal with pandas FutureWarning: Passing a set as an indexer id deprecated.
Add filters.
0.0.18#
First version of svgbit.