svgbit.load_anndata_h5#

svgbit.load_anndata_h5(read_path, **kwargs) → svgbit.core.STDataset.STDataset[source]#

Load anndata saved h5ad file and generate STDataset.

Note

load_anndata_h5 will try to use anndata.X as expression matrix.

Parameters
read_pathstr or pathlib.Path

File name to read from.

**kwargs

Additional keyword arguments passed to anndata.read_h5ad

Returns
datasetSTDataset

A STDataset instance generated from read_path.